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Cover image for Data mining in biomedical imaging, signaling, and systems
Title:
Data mining in biomedical imaging, signaling, and systems
Publication Information:
Boca Raton, FL. : Auerbach Publications, 2011.
Physical Description:
xv, 424 p. : ill. ; 24 cm.
ISBN:
9781439839386

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Item Category 1
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30000010263668 R859.7 D3538 2011 Open Access Book Book
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30000003499476 R859.7 D3538 2011 Open Access Book Book
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Summary

Summary

Data mining can help pinpoint hidden information in medical data and accurately differentiate pathological from normal data. It can help to extract hidden features from patient groups and disease states and can aid in automated decision making. Data Mining in Biomedical Imaging, Signaling, and Systems provides an in-depth examination of the biomedical and clinical applications of data mining. It supplies examples of frequently encountered heterogeneous data modalities and details the applicability of data mining approaches used to address the computational challenges in analyzing complex data.

The book details feature extraction techniques and covers several critical feature descriptors. As machine learning is employed in many diagnostic applications, it covers the fundamentals, evaluation measures, and challenges of supervised and unsupervised learning methods. Both feature extraction and supervised learning are discussed as they apply to seizure-related patterns in epilepsy patients. Other specific disorders are also examined with regard to the value of data mining for refining clinical diagnoses, including depression and recurring migraines. The diagnosis and grading of the world's fourth most serious health threat, depression, and analysis of acoustic properties that can distinguish depressed speech from normal are also described. Although a migraine is a complex neurological disorder, the text demonstrates how metabonomics can be effectively applied to clinical practice.

The authors review alignment-based clustering approaches, techniques for automatic analysis of biofilm images, and applications of medical text mining, including text classification applied to medical reports. The identification and classification of two life-threatening heart abnormalities, arrhythmia and ischemia, are addressed, and a unique segmentation method for mining a 3-D imaging biomarker, exemplified by evaluation of osteoarthritis, is also present


Author Notes

Sumeet Dua, PhD, is currently an Upchurch endowed associate professor and the coordinator of IT research at Louisiana Tech University, Ruston. He also serves as adjunct faculty to the School of Medicine, Louisiana State University, Health Sciences Center in New Orleans. His areas of expertise include data mining, image processing, computational decision support, pattern recognition, data warehousing, biomedical informatics, and heterogeneous distributed data integration. The National Science Foundation (NSF), the National Institutes of Health (NIH), the Air Force Research Laboratory (AFRL), the Air Force Office of Sponsored Research, (AFOSR), and the Louisiana Board of Regents (LA-BoR) have funded his research. He frequently serves as a study section member (expert panelist) for the NIH's Center for Scientific Review and has served as a panelist for the NSF/Computing in Science in Engineering (CISE) Directorate. Dr. Dua has chaired several conference sessions in the area of data mining and bioinformatics, and is the program chair for the 5th International Conference on Information Systems, Technology, and Management (ICISTM-2011). He has given over 26 invited talks on data mining and bioinformatics at international academic and industry arenas, advised over 25 graduate theses, and currently advises several students in this field. Dr. Dua is acoinventor of two issued U.S. patents, has co-authored over 50 publications and book chapters, and is an author /editor of 4 books in data mining and bioinformatics.

Dr. Dua has received the Engineering and Science Foundation Award for Faculty Excellence (2006) and the Faculty Research Recognition Award (2007); he has been recognized as a Distinguished Researcher (2004-2010) by the Louisiana Biomedical Research Network (sponsored by NIH) and has won the Oustanding Poster Award at the NIH/National Cancer Institute (NCI) caBIG-NCRI Informatics Joint Conference; Biomedical Informatics wi


Table of Contents

Xian Du and Sumeet DuaXian Du and Sumeet DuaAnanthakrishna T. and Kumara Shama and Venkataraya P. Bhandary and Kumar K. B. and Niranjan U. C.Mila Kwiatkowska and Krzysztof Kielan and Najib T. Ayas and C. Frank RyanRoshan Joy Martis and Chandan Chakraborty and Ajoy Kumar RayAlan ChiuHaseena H. and K. Paul Joseph and Abraham T. MathewFilippo Molinari and Pierangela Giustetto and William Liboni and Maria Cristina Valerio and Nicola Culeddu and Matilde Chessa and Cesare ManettiSubhagata Chattopadhyay and Preetisha Kaur and Fethi Rabhi and Rajendra Acharya U.Numanul Subhani and Luis Rueda and Alioune Ngom and Conrad BurdenXian DuHarpreet Singh and Sumeet DuaDario Rojas and Luis Rueda and Homero Urrutia and Gerardo Carcamo and Alioune NgomS. S. Saraf and G. R. Udupi and Santosh D. HajareSubhagata ChattopadhyayOliver Faust and Rajendra Acharya U. and Chong Wee Seong and Teik-Cheng Lim and Subhagata Chattopadhyay
Prefacep. v
Editorsp. xi
Contributorsp. xiii
1 Feature Extraction Methods in Biomedical Signaling and Imagingp. 1
2 Supervised and Unsupervised Learning Methods in Biomedical Signaling and Imagingp. 23
3 Data Mining of Acoustical Properties of Speech as Indicators of Depressionp. 47
4 Typicality Measure and the Creation of Predictive Models in Biomedicinep. 69
5 Gaussian Mixture Model-Based Clustering Technique for Electrocardiogram Analysisp. 101
6 Pattern Recognition Algorithms for Seizure Applicationsp. 119
7 Application of Parametric and Nonparametric Methods in Arrhythmia Classificationp. 145
8 Supervised and Unsupervised Metabonomic Techniques in Clinical Diagnosis: Classification of 677-MTHFR Mutations in Migraine Sufferersp. 171
9 Automatic Grading of Adult Depression Using a Backpropagation Neural Network Classifierp. 191
10 Alignment-Based Clustering of Gene Expression Time-Series Datap. 227
11 Mining of Imaging Biomarkers for Quantitative Evaluation of Osteoarthritisp. 263
12 Supervised Classification of Digital Mammogramsp. 285
13 Biofilm Image Analysis: Automatic Segmentation Methods and Applicationsp. 319
14 Discovering Association of Diseases in the Upper Gastrointestinal Tract Using Text Mining Techniquesp. 351
15 Mental Health Informatics: Scopes and Challengesp. 373
16 Systems Engineering for Medical Informaticsp. 391
Indexp. 417
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