Cover image for Statistical detection and surveillance of geographic clusters
Title:
Statistical detection and surveillance of geographic clusters
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Series:
Chapman and Hall/ CRC Interdisciplinary statistics series
Publication Information:
Boca Raton, FL : Chapman & Hall, 2009
Physical Description:
322 p. : ill. ; 25 cm.
ISBN:
9781584889359
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30000010197295 HA31 R56 2009 Open Access Book Book
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Summary

Summary

The widespread popularity of geographic information systems (GIS) has led to new insights in countless areas of application. It has facilitated not only the collection and storage of geographic data, but also the display of such data. Building on this progress by using an integrated approach, Statistical Detection and Monitoring of Geographic Clusters provides the statistical tools to identify whether data on a given map deviates significantly from expectations and to determine quickly whether new point patterns are emerging over time.

The book begins with a review of statistical methods for cluster detection, organized according to the different types of hypotheses and questions about clustering that can be investigated. It then delineates methods that allow for the quick detection of emergent geographic clusters.

The book delivers a cohesive presentation unlike that of most edited volumes. Drawing on the authors' extensive work in the field, the book delineates methods in such a way that they can be applied, almost instantly, to an array of disciplines. The readily applicable methods the book describes are useful for a multitude of problems in a variety of fields, particularly disease surveillance in the public health industry. Statistical Detection and Monitoring of Geographic Clusters is an essential volume for your reference shelf.


Author Notes

Peter Rogerson, Ikuho Yamada


Table of Contents

List of Figuresp. xv
List of Tablesp. xix
Acknowledgmentsp. xxiii
1 Introduction and Overviewp. 1
1.1 Setting the Stagep. 1
1.2 The Roles of Spatial Statistics in Public Health and Other Fieldsp. 2
1.3 Limitations Associated with the Visualization of Spatial Datap. 3
1.3.1 Visual Assessment of Clustering Tendencyp. 3
1.3.2 What to Map: Mapping Rates versus Mapping p-Valuesp. 5
1.3.2.1 Example 1: Sudden Infant Death Syndrome in North Carolinap. 6
1.3.2.2 Example 2: Breast Cancer in the Northeastern United Statesp. 7
1.4 Some Fundamental Concepts and Distinctionsp. 9
1.4.1 Descriptive versus Inferential, and Exploratory versus Confirmatory, Spatial Statisticsp. 9
1.4.2 Types of Health Datap. 10
1.4.2.1 Point Datap. 10
1.4.2.2 Case-Control Datap. 10
1.4.2.3 Areal Datap. 10
1.4.2.4 Time-Subscripted Datap. 11
1.5 Types of Tests for Clusteringp. 11
1.6 Structure of the Bookp. 12
1.7 Software Resources and Sample Datap. 13
1.7.1 Software Resourcesp. 13
1.7.1.1 GeoSurveillancep. 13
1.7.1.2 GeoDap. 13
1.7.1.3 Rp. 13
1.7.1.4 SaTScanp. 13
1.7.1.5 Cancer Atlas Viewerp. 14
1.7.1.6 CrimeStatp. 14
1.7.2 Sample Datasetsp. 14
1.7.2.1 Breast Cancer Mortality in the Northeastern United Statesp. 14
1.7.2.2 Prostate Cancer Mortality in the United Statesp. 15
1.7.2.3 Sudden Infant Death Syndrome in North Carolinap. 16
1.7.2.4 Leukemia in Central New York Statep. 16
1.7.2.5 Leukemia and Lymphoma Case-Control Data in Englandp. 16
1.7.2.6 Low Birthweight in Californiap. 18
2 Introductory Spatial Statistics: Description and Inferencep. 21
2.1 Introductionp. 21
2.2 Mean Centerp. 22
2.3 Median Centerp. 23
2.4 Standard Distancep. 23
2.5 Relative Standard Distancep. 25
2.6 Inferential Statistical Tests of Central Tendency and Dispersionp. 25
2.7 Illustrationp. 27
2.8 Angular Datap. 29
2.9 Characteristics of Spatial Processes: First-Order and Second-Order Variationp. 31
2.10 Kernel Density Estimationp. 32
2.11 K-Functionsp. 35
2.12 Differences and Ratios of Kernel Density Estimatorsp. 37
2.13 Differences in K-Functionsp. 40
3 Global Statisticsp. 43
3.1 Introductionp. 43
3.2 Nearest Neighbor Statisticp. 44
3.2.1 Illustrationp. 45
3.3 Quadrat Methodsp. 46
3.3.1 Unconditional Approachp. 47
3.3.2 Conditional Approachp. 48
3.3.2.1 Example 1: Leukemia in Central New York Statep. 49
3.3.2.2 Example 2: Sudden Infant Death Syndrome in North Carolinap. 49
3.3.2.3 Example 3: Lung Cancer in Cambridgeshirep. 50
3.3.3 Minimum Expected Frequenciesp. 51
3.3.4 Issues Associated with Scalep. 51
3.3.5 Testing with Multiple Quadrat Sizesp. 52
3.3.6 Optimal Quadrat Size: Appropriate Spatial Scales for Cluster Detectionp. 53
3.3.7 A Comparison of Alternative Quadrat-Based Global Statisticsp. 54
3.4 Spatial Dependence: Moran's Ip. 56
3.4.1 Illustrationp. 57
3.4.2 Example: Low Birthweight Cases in Californiap. 59
3.5 Geary's Cp. 59
3.5.1 Illustrationp. 60
3.5.2 Example: Low Birthweight Cases in Californiap. 60
3.6 A Comparison of Moran's I and Geary's Cp. 61
3.6.1 Example: Spatial Variation in Handedness in the United Statesp. 62
3.6.2 Statistical Power of I and Cp. 64
3.7 Oden's I[subscript pop] Statisticp. 67
3.7.1 Illustrationp. 68
3.8 Tango's Statistic and a Spatial Chi-Square Statisticp. 69
3.8.1 Illustrationp. 71
3.8.2 Example: Sudden Infant Death Syndrome in North Carolinap. 71
3.9 Getis and Ord's Global Statisticp. 73
3.9.1 Example: Low Birthweight Cases in Californiap. 74
3.10 Case-Control Data: The Cuzick-Edwards Testp. 75
3.10.1 Illustrationp. 76
3.11 A Global Quadrat Test of Clustering for Case-Control Datap. 76
3.11.1 Examplep. 78
3.11.2 Spatial Scalep. 80
3.12 A Modified Cuzick-Edwards Testp. 80
3.12.1 Example: Leukemia and Lymphoma Case-Control Data in Englandp. 82
4 Local Statisticsp. 85
4.1 Introductionp. 85
4.2 Local Moran Statisticp. 86
4.2.1 Illustrationp. 87
4.2.2 Example: Low Birthweight Cases in Californiap. 87
4.3 Score Statisticp. 89
4.3.1 Illustrationp. 90
4.4 Tango's C[subscript F] Statisticp. 91
4.4.1 Illustrationp. 92
4.5 Getis' G[subscript i] Statisticp. 93
4.5.1 Illustrationp. 94
4.5.2 Example: Low Birthweight Cases in Californiap. 95
4.6 Stone's Testp. 95
4.6.1 Illustrationp. 96
4.7 Modeling around Point Sources with Case-Control Datap. 96
4.8 Cumulative and Maximum Chi-Square Tests as Focused Testsp. 97
4.8.1 Illustrationp. 99
4.8.2 Example: Leukemia and Lymphoma Case-Control Data in Englandp. 100
4.8.3 Discreteness of the Maximum Chi-Square Statisticp. 101
4.8.4 Relative Power of the Two Testsp. 101
4.9 The Local Quadrat Test and an Introduction to Multiple Testing via the M-Testp. 102
4.9.1 Fuchs and Kenett's M Testp. 103
4.9.2 Example 1: Sudden Infant Death Syndrome in North Carolinap. 105
4.9.3 Example 2: Lung Cancer in Cambridgeshirep. 105
5 Tests for the Detection of Clustering, Including Scan Statisticsp. 107
5.1 Introductionp. 107
5.2 Openshaw et al.'s Geographical Analysis Machine (GAM)p. 108
5.3 Besag and Newell's Test for the Detection of Clustersp. 109
5.4 Fotheringham and Zhan's Methodp. 110
5.5 Cluster Evaluation Permutation Procedurep. 111
5.6 Exploratory Spatial Analysis Approach of Rushton and Lolonisp. 112
5.7 Kulldorff's Spatial Scan Statistic with Variable Window Sizep. 113
5.7.1 Example 1: Low Birthweight Cases in California (Areal Data)p. 113
5.7.2 Example 2: LBW Cases in California (Point Data)p. 117
5.8 Bonferroni and Sidak Adjustmentsp. 119
5.8.1 Power Loss with the Bonferroni Adjustmentp. 121
5.9 Improvements on the Bonferroni Adjustmentp. 122
5.10 Rogerson's Statistical Method for the Detection of Geographic Clusteringp. 123
5.10.1 The Geometry of Random Fieldsp. 125
5.10.2 Illustrationp. 125
5.10.3 Approximation for Discreteness of Observationsp. 126
5.10.4 Approximations for the Exceedance Probabilityp. 127
5.10.5 An Approach Based on the Effective Number of Independent Reselsp. 128
5.10.6 Examplep. 130
5.10.7 Discussionp. 133
6 Retrospective Detection of Changing Spatial Patternsp. 135
6.1 Introductionp. 135
6.2 The Knox Statistic for Space-Time Interactionp. 135
6.2.1 Illustrationp. 137
6.3 Test for a Change in Mean for a Series of Normally Distributed Observationsp. 137
6.3.1 Examplep. 138
6.4 Retrospective Detection of Change in Multinomial Probabilitiesp. 140
6.4.1 Illustrationp. 141
6.4.2 Example 1: Breast Cancer Mortality in the Northeastern United Statesp. 143
6.4.3 Example 2: Recent Changes in the Spatial Pattern of Prostate Cancer Mortality in the United Statesp. 145
6.4.3.1 Introductionp. 145
6.4.3.2 Geographic Variation in Incidence and Mortality Ratesp. 146
6.4.3.3 Datap. 146
6.4.3.4 Descriptive Measures of Changep. 147
6.4.3.5 Retrospective Detection of Changep. 148
6.4.3.6 Discussionp. 153
6.4.4 Example 3: Crimep. 156
7 Introduction to Statistical Process Control and Nonspatial Cumulative Sum Methods of Surveillancep. 157
7.1 Introductionp. 157
7.2 Shewhart Chartsp. 158
7.2.1 Illustrationp. 159
7.3 Cumulative Sum (Cusum) Methodsp. 160
7.3.1 Illustrationp. 163
7.4 Monitoring Small Countsp. 165
7.4.1 Transformations to Normalityp. 166
7.5 Cumulative Sums for Poisson Variablesp. 167
7.5.1 Cusum Charts for Poisson Datap. 167
7.5.1.1 Example: Kidney Failure in Catsp. 168
7.5.2 Poisson Cusums with Time-Varying Expectationsp. 169
7.5.2.1 Example: Lower Respiratory Infection Episodesp. 170
7.6 Cusum Methods for Exponential Datap. 171
7.6.1 Illustrationp. 173
7.7 Other Useful Modifications for Cusum Chartsp. 174
7.7.1 Fast Initial Responsep. 174
7.7.2 Unknown Process Parametersp. 175
7.8 More on the Choice of Cusum Parametersp. 176
7.8.1 Approximations for the Critical Threshold h for Given Choices of k and the In-Control ARL[subscript 0]p. 177
7.8.2 Approximations for the Critical Threshold h for Given Choices of k and the Out-of-Control ARL[subscript 1]p. 179
7.8.3 The Choice of k and h for Desired Values of ARL[subscript 0] and ARL[subscript 1]p. 181
7.9 Other Methods for Temporal Surveillancep. 183
8 Spatial Surveillance and the Monitoring of Global Statisticsp. 185
8.1 Brief Overview of the Development of Methods for Spatial Surveillancep. 185
8.2 Introduction to Monitoring Global Spatial Statisticsp. 188
8.3 Cumulative Sum Methods and Global Spatial Statistics That Are Observed Periodicallyp. 190
8.3.1 Moran's I and Getis' Gp. 190
8.3.1.1 Example: Breast Cancer Mortality in the Northeastern United Statesp. 191
8.3.2 Monitoring Chi-Square Statisticsp. 196
8.3.2.1 Illustrationp. 197
8.4 CUSUM Methods and Global Spatial Statistics That Are Updated Periodicallyp. 198
8.4.1 Spatial Surveillance Using Tango's Test for General Clusteringp. 199
8.4.1.1 Illustrationp. 200
8.4.1.2 Example: Burkitt's Lymphoma in Ugandap. 203
8.4.1.3 Discussionp. 206
8.4.2 A Cusum Method Based upon the Knox Statistic: Monitoring Point Patterns for the Development of Space-Time Clustersp. 207
8.4.2.1 A Local Knox Statisticp. 207
8.4.2.2 A Method for Monitoring Changes in Space-Time Interactionp. 210
8.4.2.3 Example: Burkitt's Lymphoma in Ugandap. 211
8.4.2.4 Summary and Discussionp. 212
8.4.3 Cusum Method Combined with Nearest-Neighbor Statisticp. 214
8.4.3.1 Monitoring Changes in Point Patternsp. 214
8.4.3.2 A Cusum Approach for the Nearest-Neighbor Statisticp. 215
8.4.3.3 Simulations of Clustering in the Unit Squarep. 217
8.4.3.4 Example: Application to Crime Analysis and Data from the Buffalo Police Departmentp. 218
8.4.3.5 Cusum Approach for Arson Datap. 218
8.4.3.6 Surveillance Using a Moving Window of Observationsp. 222
8.5 Summary and Discussionp. 228
9 Cusum Charts for Local Statistics and for the Simultaneous Monitoring of Many Regionsp. 231
9.1 Monitoring around a Predefined Locationp. 231
9.1.1 Introductionp. 231
9.1.2 Raubertas' Approach to Monitoring Local Statisticsp. 231
9.1.3 Monitoring a Single Local Statistic: Autocorrelated Regional Variablesp. 232
9.1.4 An Approach Based on Score Statisticsp. 233
9.1.5 Spatial Surveillance around Foci: A Generalized Score Statistic, Tango's C[subscript F]p. 233
9.1.6 A Distance-Based Methodp. 235
9.1.6.1 Application to Data on Burkitt's Lymphomap. 236
9.1.7 Surveillance around Prespecified Locations Using Case-Control Datap. 238
9.1.7.1 Introductionp. 238
9.1.7.2 Prospective Monitoring around a Source, Using Case-Control Datap. 238
9.1.7.3 Illustrationp. 239
9.2 Spatial Surveillance: Separate Charts for Each Regionp. 243
9.2.1 Illustrationp. 245
9.2.2 Example: Kidney Failure in Catsp. 249
9.2.3 Example: Breast Cancer Mortality in the Northeastern United Statesp. 250
9.3 Monitoring Many Local Statistics Simultaneouslyp. 252
9.3.1 Example: Breast Cancer Mortality in the Northeastern United Statesp. 255
9.3.2 Poisson Variablesp. 256
9.4 Summaryp. 257
Appendixp. 257
10 More Approaches to the Statistical Surveillance of Geographic Clusteringp. 259
10.1 Introductionp. 259
10.2 Monitoring Spatial Maximap. 260
10.2.1 Monitoring Spatial Maximap. 261
10.2.1.1 Type I Extreme Value (Gumbel) Distributionp. 262
10.2.1.2 Cusum Surveillance of Gumbel Variatesp. 263
10.2.1.3 Example: Female Breast Cancer Mortality Rates in the Northeastern United Statesp. 264
10.2.1.4 Example: Prostate Cancer Data in the United Statesp. 266
10.2.2 Determination of Threshold Parameterp. 268
10.2.3 Summaryp. 268
10.3 Multivariate Cusum Approachesp. 269
10.3.1 Introductionp. 269
10.3.2 Alternative Approaches to Monitoring Regional Change for More Than One Regionp. 270
10.3.3 Methods and Illustrationsp. 271
10.3.3.1 Multivariate Monitoringp. 271
10.3.3.2 Hypothetical, Simulated Scenariosp. 272
10.3.3.3 Spatial Autocorrelationp. 276
10.3.4 Example: Breast Cancer Mortality in the Northeastern United Statesp. 278
10.3.4.1 Multiple Univariate Resultsp. 280
10.3.4.2 Multivariate Resultsp. 283
10.3.4.3 Interpretation of Multivariate Resultsp. 283
10.3.4.4 Estimation of Covariance and a Nonparametric Approachp. 285
10.3.5 Discussionp. 287
11 Summary: Associated Tests for Cluster Detection and Surveillancep. 289
11.1 Introductionp. 289
11.2 Associated Retrospective Statistical Testsp. 290
11.2.1 Associated Retrospective Statistical Tests: Aspatial Casep. 291
11.2.2 Associated Retrospective Statistical Tests: Spatial Casep. 292
11.2.3 Maximum Local Statisticp. 296
11.2.4 Illustrationp. 297
11.2.5 Example: Application to Leukemia Data for Central New York Statep. 297
11.3 Associated Prospective Statistical Tests: Regional Surveillance for Quick Detection of Changep. 300
11.3.1 Prospective Methods: Aspatial Casep. 300
11.3.2 Prospective Methods: Spatial Casep. 301
Referencesp. 303
Author Indexp. 313
Subject Indexp. 317