Cover image for Fungi : biology and applications
Title:
Fungi : biology and applications
Edition:
2nd ed.
Publication Information:
Hoboken, NJ : John Wiley & Sons, 2011.
Physical Description:
ix,366p. ill.; 25 cm.
ISBN:
9780470977101

9780470977095
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30000010118553 TP248.27.F86 F86 2011 Open Access Book Book
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30000010118552 TP248.27.F86 F86 2011 Open Access Book Book
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Summary

Summary

Fungi: Biology and Applications , Second Edition provides a comprehensive treatment of fungi, covering biochemistry, genetics and the medical and economic significance of these organisms at introductory level. With no prior knowledge of the subject assumed, the opening chapters offer a broad overview of the basics of fungal biology, in particular the physiology and genetics of fungi and also a new chapter on the application of genomics to fungi. Later chapters move on to include more detailed coverage of topics such as antibiotic and chemical commodities from fungi, new chapters on biotechnological use of fungal enzymes and fungal proteomics, and fungal diseases of humans, antifungal agents for use in human therapy and fungal pathogens of plants.


Table of Contents

Graeme M. Walker and Nia A. WhiteMalcolm Whiteway and Catherine BachewichDavid Fitzpatrick and Edgar Mauricio Medina TovarBrendan Curran and Virginia BugejaKevin KavanaghKarina A. Horgan and Richard A. MurphyShauna M. McKelvey and Richard A. MurphyBrendan Curran and Virginia BugejaSean DoyleDerek Sullivan and Gary Moran and David C. ColemanKhaled H. Abu-Elteen and Mawieh HamadFiona Doohan
List of Contributorsp. ix
1 Introduction to Fungal Physiologyp. 1
1.1 Introductionp. 1
1.2 Morphology of Yeasts and Fungip. 2
1.3 Ultrastructure and Function of Fungal Cellsp. 4
1.4 Fungal Nutrition and Cellular Biosynthesesp. 11
1.5 Fungal Metabolismp. 21
1.6 Fungal Growth and Reproductionp. 26
1.7 Conclusionsp. 33
Revision Questionsp. 33
Referencesp. 34
Further Readingp. 34
2 Fungal Geneticsp. 37
2.1 Introductionp. 37
2.2 Fungal Life Cyclesp. 39
2.3 Sexual Analysis: Regulation of Matingp. 46
2.4 Unique Characteristics of Filamentous Fungi that are Advantageous for Genetic Analysisp. 51
2.5 Genetics as a Toolp. 52
2.6 Conclusionp. 62
Acknowledgementp. 63
Revision Questionsp. 63
Referencesp. 64
Further Readingp. 64
3 Fungal Genomicsp. 67
3.1 Introductionp. 67
3.2 Genome Sequencingp. 73
3.3 Bioinformatics Toolsp. 77
3.4 Comparative Genomicsp. 83
3.5 Genomics and the Fungal Tree of Lifep. 87
3.6 Online Fungal Genomic Resourcesp. 89
3.7 Conclusionp. 92
Revision Questionsp. 92
Further Readingp. 93
4 Fungal Genetics: A Post-Genomic Perspectivep. 95
4.1 Introductionp. 95
4.2 Genomicsp. 96
4.3 Transcriptomics and Proteomicsp. 106
4.4 Proteomicsp. 110
4.5 Systems Biologyp. 119
4.6 Conclusionp. 121
Revision Questionsp. 121
Referencesp. 122
Further Readingp. 122
5 Fungal Fermentations Systems and Productsp. 125
5.1 Introductionp. 125
5.2 Fungal Fermentation Systemsp. 126
5.3 Commercial Fungal Productsp. 132
5.4 Conclusionp. 145
Revision Questionsp. 145
Referencep. 145
Further Readingp. 146
6 Pharmaceutical and Chemical Commodities from Fungip. 147
6.1 Introduction to Pharmaceutical and Chemical Commoditiesp. 147
6.2 Fungal Metabolismp. 148
6.3 Antibiotic Productionp. 150
6.4 Pharmacologically Active Productsp. 156
6.5 Chemical Commoditiesp. 162
6.6 Yeast Extractsp. 172
6.7 Enriched Yeastp. 174
6.8 Conclusionsp. 177
Revision Questionsp. 177
Referencesp. 178
Further Readingp. 178
7 Biotechnological Use of Fungal Enzymesp. 179
7.1 Introduction to Enzymesp. 179
7.2 Enzymes in Industryp. 180
7.3 Current Enzyme Applicationsp. 180
7.4 Future Direction of Industrial Enzymesp. 186
7.5 Specific Enzymesp. 186
7.6 Enzyme Production Strategiesp. 201
7.7 Conclusionsp. 202
Revision Questionsp. 203
Referencesp. 203
Further Readingp. 203
8 The Biotechnological Exploitation of Heterologous Protein Production in Fungip. 205
8.1 Introductionp. 205
8.2 Heterologous Protein Expression in Fungip. 206
8.3 Case Study: Hepatitis B Vaccine: A Billion Dollar Heterologous Protein from Yeastp. 218
8.4 Further Biotechnological Applications of Expression Technologyp. 222
8.5 Conclusionsp. 227
Revision Questionsp. 227
Further Readingp. 228
9 Fungal Proteomicsp. 231
9.1 Introductionp. 231
9.2 Protein Isolation and Purificationp. 234
9.3 Electrophoretic Techniquesp. 237
9.4 Protein Mass Spectrometryp. 240
9.5 Fungal Proteomicsp. 247
9.6 Specialized Proteomics Applications in Fungal Researchp. 252
9.7 Conclusionp. 253
Revision Questionsp. 254
Further Readingp. 254
10 Fungal Infections of Humansp. 257
10.1 Introductionp. 257
10.2 Superficial Mycosesp. 258
10.3 Opportunistic Mycosesp. 259
10.4 Endemic Systemic Mycosesp. 273
10.5 Mycotoxicosesp. 275
10.6 Concluding Remarksp. 276
Revision Questionsp. 277
Further Readingp. 278
11 Antifungal Agents for Use in Human Therapyp. 279
11.1 Introductionp. 279
11.2 Drugs Targeting the Plasma Membranep. 281
11.3 Drugs Targeting the Cell Wallp. 296
11.4 Drugs Targeting Nucleic Acid and Protein Synthesisp. 300
11.5 Novel Therapiesp. 304
11.6 Conclusionsp. 310
Revision Questionsp. 310
Referencep. 311
Further Readingp. 311
12 Fungal Pathogens of Plantsp. 313
12.1 Fungal Pathogens of Plantsp. 313
12.2 Disease Symptomsp. 314
12.3 Factors Influencing Disease Developmentp. 318
12.4 The Disease Cyclep. 319
12.5 Genetics of the Plant-Fungal Pathogen Interactionp. 320
12.6 Mechanisms of Fungal Plant Parasitismp. 320
12.7 Mechanisms of Host Defencep. 324
12.8 Disease Controlp. 326
12.9 Disease Detection and Diagnosisp. 329
12.10 Vascular Wilt Diseasesp. 331
12.11 Blightsp. 334
12.12 Rots and Damping-Off Diseasesp. 336
12.13 Leaf and Stem Spots, Anthracnose and Scabsp. 338
12.14 Rusts, Smuts and Powdery Mildew Diseasesp. 339
12.15 Global Repercussions of Fungal Diseases of Plantsp. 340
12.16 Conclusionsp. 342
Acknowledgementsp. 342
Revision Questionsp. 342
Referencesp. 343
Further Readingp. 343
Answers to Revision Questionsp. 345
Indexp. 363